Contract Services

TACG TACG- DNA restriction enzyme analysis. Provides a number of hits per enzyme and a list of non-cutters. Allows for selection of the enzymes and parameters. REBsites REBsites- Provides restriction enzyme digest analysis of the input DNA sequence. Results are presented graphically as a "virtual gel". ORF Finder ORF Finder- Identifies all ORFs using the standard or alternative genetic codes. Provides an interactive, graphical interface and allow for saving of a deduced amino acid sequence… StarORF StarORF- A Java application that facilitates the identification of potential ORFs, based on provided DNA sequence and probable ORF length. Primer-BLAST Primer-BLAST- Provides primers specific to the PCR template sequence. Includes primer pair specificity checking against a selected database. Oligo Calc: Oligonucleotide Properties Calculator Oligo Calc: Oligonucleotide Properties Calculator- Provides reverse complement sequence for DNA or RNA primer strands, self complementarity check, physical and thermodynamic const… Readseq Readseq- Converts amino acid and nucleotide sequence data formats including FASTA, GenBank, Phylip and others. Maintained by NIH, USA. NEBcutter NEBcutter- Provides a DNA sequence analysis to find restriction enzymes sites. Finds also non-overlapping open reading frames using the E.coli genetic code. PlasMapper PlasMapper- Offers server generated plasmid maps and image files, from input DNA sequences up to 20,000 bp. Includes citation, and downloadable source code. Maintained by the Univ… Graphical Codon Usage Analyzer Graphical Codon Usage Analyzer- Displays the codon quality in two different ways, codon usage frequency or relative adaptiveness values. FAQ included. RestrictionMapper RestrictionMapper- Finds restriction enzyme cleavage sites in linear and circular DNA sequences. Provides also a virtual digest function. WatCut WatCut- Provides restriction analysis, silent mutation scanning and SNP-RFLP analysis. Allows for utilization of all commercially available type II restriction enzymes. REBASE REBASE- The restriction enzyme database. Maintained by the New England Biolabs, USA. Journal of Theoretical Biology Journal of Theoretical Biology- This journal is the leading forum for theoretical papers that give insight into biological processes. It covers a very wide range of topics and is … Theoretical Population Biology Theoretical Population Biology- This journal presents articles on the theoretical aspects of the biology of populations, particularly in the areas of ecology, genetics, demography… Acta Biotheoretica Acta Biotheoretica- International journal on the mathematical and philosophical foundations of biological and biomedical science. Papers cover a range of biological theories inclu…